STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612945_00777Unannotated protein. (194 aa)    
Predicted Functional Partners:
GCA_001612945_00776
Unannotated protein.
  
  
 0.980
GCA_001612945_00778
Unannotated protein.
  
    0.894
GCA_001612945_00779
Unannotated protein.
  
    0.894
GCA_001612945_07356
Unannotated protein.
  
  
 0.807
GCA_001612945_04829
Unannotated protein.
  
  
 0.795
GCA_001612945_00664
Unannotated protein.
 
  
 0.696
GCA_001612945_00142
Unannotated protein.
  
    0.582
GCA_001612945_03182
Unannotated protein.
 
     0.576
GCA_001612945_00775
Unannotated protein.
       0.559
GCA_001612945_03449
Unannotated protein.
   
  
 0.539
Your Current Organism:
Nocardia inohanensis
NCBI taxonomy Id: 1210077
Other names: N. inohanensis NBRC 100128, Nocardia inohanensis NBRC 100128
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.