STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001612945_04219Unannotated protein. (409 aa)    
Predicted Functional Partners:
GCA_001612945_04218
Unannotated protein.
       0.790
GCA_001612945_04220
Unannotated protein.
       0.773
GCA_001612945_00393
Unannotated protein.
  
 0.656
GCA_001612945_00284
Unannotated protein.
     
 0.528
GCA_001612945_02320
Unannotated protein.
     
 0.528
GCA_001612945_02876
Unannotated protein.
   
    0.499
GCA_001612945_05896
Unannotated protein.
   
    0.499
GCA_001612945_04395
Unannotated protein.
  
     0.426
GCA_001612945_03758
Unannotated protein.
   
 
  0.409
Your Current Organism:
Nocardia inohanensis
NCBI taxonomy Id: 1210077
Other names: N. inohanensis NBRC 100128, Nocardia inohanensis NBRC 100128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.