STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613025_02612Unannotated protein. (370 aa)    
Predicted Functional Partners:
GCA_001613025_02613
Unannotated protein.
  
  
 0.968
GCA_001613025_02610
Unannotated protein.
     
 0.941
GCA_001613025_02611
Unannotated protein.
     
 0.934
GCA_001613025_02614
Unannotated protein.
       0.746
GCA_001613025_00907
Unannotated protein.
  
     0.663
GCA_001613025_03117
Unannotated protein.
 
     0.649
GCA_001613025_06144
Unannotated protein.
  
     0.608
GCA_001613025_04944
Unannotated protein.
  
     0.532
GCA_001613025_02929
Unannotated protein.
  
     0.518
GCA_001613025_00463
Unannotated protein.
  
     0.505
Your Current Organism:
Nocardia jinanensis
NCBI taxonomy Id: 1210082
Other names: N. jinanensis NBRC 108249, Nocardia jinanensis NBRC 108249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.