STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613025_04956Unannotated protein. (162 aa)    
Predicted Functional Partners:
GCA_001613025_05619
Unannotated protein.
  
     0.769
GCA_001613025_07250
Unannotated protein.
  
     0.767
GCA_001613025_06603
Unannotated protein.
  
     0.765
GCA_001613025_02358
Unannotated protein.
  
    0.764
GCA_001613025_04374
Unannotated protein.
  
   
 0.764
GCA_001613025_03660
Unannotated protein.
  
     0.763
GCA_001613025_00752
Unannotated protein.
  
     0.754
GCA_001613025_04199
Unannotated protein.
  
     0.751
GCA_001613025_02368
Unannotated protein.
  
     0.749
GCA_001613025_05168
Unannotated protein.
  
     0.749
Your Current Organism:
Nocardia jinanensis
NCBI taxonomy Id: 1210082
Other names: N. jinanensis NBRC 108249, Nocardia jinanensis NBRC 108249
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.