STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613025_05547Unannotated protein. (153 aa)    
Predicted Functional Partners:
GCA_001613025_02850
Unannotated protein.
 
  
  0.773
GCA_001613025_02121
Unannotated protein.
  
 
 0.753
GCA_001613025_00854
Unannotated protein.
    
  0.725
GCA_001613025_01036
Unannotated protein.
    
  0.725
GCA_001613025_00155
Unannotated protein.
    
  0.721
GCA_001613025_04266
Unannotated protein.
    
  0.721
GCA_001613025_03162
Unannotated protein.
  
 
 0.714
GCA_001613025_03166
Unannotated protein.
  
 
 0.714
GCA_001613025_05546
Unannotated protein.
       0.700
GCA_001613025_06263
Unannotated protein.
     
 0.619
Your Current Organism:
Nocardia jinanensis
NCBI taxonomy Id: 1210082
Other names: N. jinanensis NBRC 108249, Nocardia jinanensis NBRC 108249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.