STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613025_05680Unannotated protein. (181 aa)    
Predicted Functional Partners:
GCA_001613025_04760
Unannotated protein.
    
 0.778
GCA_001613025_05679
Unannotated protein.
       0.773
GCA_001613025_04024
Unannotated protein.
   
 
 0.746
GCA_001613025_00648
Unannotated protein.
    
  0.730
GCA_001613025_02713
Unannotated protein.
    
  0.728
GCA_001613025_03832
Unannotated protein.
  
 
 0.713
GCA_001613025_03446
Unannotated protein.
  
     0.702
GCA_001613025_04744
Unannotated protein.
    
  0.545
GCA_001613025_00560
Unannotated protein.
    
  0.540
GCA_001613025_02018
Unannotated protein.
    
  0.540
Your Current Organism:
Nocardia jinanensis
NCBI taxonomy Id: 1210082
Other names: N. jinanensis NBRC 108249, Nocardia jinanensis NBRC 108249
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.