STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613045_02347Unannotated protein. (255 aa)    
Predicted Functional Partners:
GCA_001613045_02566
Unannotated protein.
 
  
  0.619
GCA_001613045_04183
Unannotated protein.
    
  0.565
GCA_001613045_05142
Unannotated protein.
    
  0.555
GCA_001613045_06235
Unannotated protein.
  
     0.524
GCA_001613045_02949
Unannotated protein.
  
 
  0.517
GCA_001613045_02769
Unannotated protein.
  
 
  0.515
GCA_001613045_03138
Unannotated protein.
  
 
  0.512
GCA_001613045_03544
Unannotated protein.
  
 
  0.509
GCA_001613045_02718
Unannotated protein.
  
 
  0.507
GCA_001613045_03009
Unannotated protein.
  
 
  0.507
Your Current Organism:
Nocardia lijiangensis
NCBI taxonomy Id: 1210083
Other names: N. lijiangensis NBRC 108240, Nocardia lijiangensis NBRC 108240
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.