STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613045_04525Unannotated protein. (583 aa)    
Predicted Functional Partners:
GCA_001613045_05507
Unannotated protein.
  
     0.730
GCA_001613045_04805
Unannotated protein.
  
     0.710
GCA_001613045_03350
Unannotated protein.
  
     0.706
GCA_001613045_02378
Unannotated protein.
  
     0.699
GCA_001613045_00749
Unannotated protein.
 
     0.661
GCA_001613045_04239
Unannotated protein.
  
     0.658
GCA_001613045_02196
Unannotated protein.
  
     0.633
GCA_001613045_07116
Unannotated protein.
  
     0.628
GCA_001613045_01839
Unannotated protein.
  
     0.620
GCA_001613045_01799
Unannotated protein.
  
   
 0.587
Your Current Organism:
Nocardia lijiangensis
NCBI taxonomy Id: 1210083
Other names: N. lijiangensis NBRC 108240, Nocardia lijiangensis NBRC 108240
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.