STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613045_06708Unannotated protein. (264 aa)    
Predicted Functional Partners:
GCA_001613045_06707
Unannotated protein.
 
  
  0.801
GCA_001613045_00726
Unannotated protein.
  
     0.765
GCA_001613045_00681
Unannotated protein.
  
 0.757
GCA_001613045_03234
Unannotated protein.
  
  
  0.685
GCA_001613045_03461
Unannotated protein.
  
  
  0.674
GCA_001613045_06706
Unannotated protein.
    
  0.670
GCA_001613045_04535
Unannotated protein.
  
 0.667
GCA_001613045_01845
Unannotated protein.
  
 
 0.636
GCA_001613045_01867
Unannotated protein.
  
 0.631
GCA_001613045_01107
Unannotated protein.
  
 0.629
Your Current Organism:
Nocardia lijiangensis
NCBI taxonomy Id: 1210083
Other names: N. lijiangensis NBRC 108240, Nocardia lijiangensis NBRC 108240
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.