STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613065_03128Unannotated protein. (309 aa)    
Predicted Functional Partners:
GCA_001613065_02748
Unannotated protein.
    
 0.887
GCA_001613065_08905
Unannotated protein.
    
 0.886
GCA_001613065_05476
Unannotated protein.
  
    0.751
GCA_001613065_07644
Unannotated protein.
   
    0.744
GCA_001613065_01923
Unannotated protein.
   
    0.696
GCA_001613065_05714
Unannotated protein.
    
  0.670
GCA_001613065_02752
Unannotated protein.
    
 0.617
GCA_001613065_03129
Unannotated protein.
       0.475
GCA_001613065_08251
Unannotated protein.
   
 
 0.468
GCA_001613065_08557
Unannotated protein.
   
 
 0.468
Your Current Organism:
Nocardia miyunensis
NCBI taxonomy Id: 1210084
Other names: N. miyunensis NBRC 108239, Nocardia miyunensis NBRC 108239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.