STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613065_08560Unannotated protein. (95 aa)    
Predicted Functional Partners:
GCA_001613065_06909
Unannotated protein.
  
     0.565
GCA_001613065_08559
Unannotated protein.
       0.472
GCA_001613065_00928
Unannotated protein.
  
     0.445
GCA_001613065_06112
Unannotated protein.
  
     0.435
GCA_001613065_02082
Unannotated protein.
  
     0.418
GCA_001613065_02694
Unannotated protein.
 
     0.415
GCA_001613065_05590
Unannotated protein.
  
     0.404
GCA_001613065_05433
Unannotated protein.
  
     0.400
Your Current Organism:
Nocardia miyunensis
NCBI taxonomy Id: 1210084
Other names: N. miyunensis NBRC 108239, Nocardia miyunensis NBRC 108239
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.