STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFR76_107346Unannotated protein. (532 aa)    
Predicted Functional Partners:
DFR76_107345
Unannotated protein.
 
     0.749
DFR76_107348
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.611
DFR76_107304
Unannotated protein.
  
     0.574
DFR76_107344
Unannotated protein; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.539
DFR76_107347
Unannotated protein.
       0.530
DFR76_10773
Unannotated protein.
  
     0.483
DFR76_107343
Unannotated protein.
       0.476
DFR76_107349
Unannotated protein.
       0.461
DFR76_112210
Unannotated protein.
 
     0.447
DFR76_101627
Unannotated protein.
  
     0.443
Your Current Organism:
Nocardia pseudobrasiliensis
NCBI taxonomy Id: 1210086
Other names: N. pseudobrasiliensis NBRC 108224, Nocardia pseudobrasiliensis NBRC 108224
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.