STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613145_03473Unannotated protein. (396 aa)    
Predicted Functional Partners:
GCA_001613145_03475
Unannotated protein.
 
   
 0.929
GCA_001613145_03474
Unannotated protein.
 
     0.855
GCA_001613145_03471
Unannotated protein.
 
   
 0.785
GCA_001613145_03477
Unannotated protein.
  
     0.767
GCA_001613145_06111
Unannotated protein.
  
     0.754
GCA_001613145_03472
Unannotated protein.
 
   
 0.749
GCA_001613145_07244
Unannotated protein.
  
     0.733
GCA_001613145_03687
Unannotated protein.
  
     0.720
GCA_001613145_03476
Unannotated protein.
  
     0.719
GCA_001613145_04696
Unannotated protein.
  
     0.715
Your Current Organism:
Nocardia jejuensis
NCBI taxonomy Id: 1210088
Other names: N. jejuensis NBRC 103114, Nocardia jejuensis NBRC 103114
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.