STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFR68_105482Unannotated protein. (119 aa)    
Predicted Functional Partners:
DFR68_105483
Unannotated protein.
  
    0.626
DFR68_111205
Unannotated protein.
  
 
  0.572
DFR68_11393
Unannotated protein.
  
     0.572
DFR68_1028
Unannotated protein.
  
  
  0.562
DFR68_105480
Unannotated protein.
       0.559
DFR68_105481
Unannotated protein.
       0.559
proS-2
Unannotated protein; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.496
DFR68_117120
Unannotated protein.
  
     0.472
DFR68_11198
Unannotated protein.
  
     0.463
DFR68_105484
Unannotated protein.
     
 0.452
Your Current Organism:
Nocardia mexicana
NCBI taxonomy Id: 1210089
Other names: N. mexicana NBRC 108244, Nocardia mexicana NBRC 108244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.