STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFR68_102576Unannotated protein. (115 aa)    
Predicted Functional Partners:
DFR68_107311
Unannotated protein.
  
 
 0.955
DFR68_12527
Unannotated protein; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
  
 
 0.937
DFR68_106454
Unannotated protein.
  
 
 0.922
DFR68_105329
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 0.918
DFR68_106226
Unannotated protein.
  
  
  0.914
DFR68_10627
Unannotated protein.
  
  
  0.911
DFR68_107312
Unannotated protein.
  
 0.908
DFR68_110227
Unannotated protein; Belongs to the TPP enzyme family.
  
 0.903
glyA
Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.902
trpB
Unannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
 0.900
Your Current Organism:
Nocardia mexicana
NCBI taxonomy Id: 1210089
Other names: N. mexicana NBRC 108244, Nocardia mexicana NBRC 108244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.