STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFR68_110276Unannotated protein. (365 aa)    
Predicted Functional Partners:
DFR68_108198
Unannotated protein.
    
 0.744
DFR68_105308
Unannotated protein; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
  0.650
DFR68_107373
Unannotated protein.
  
 
 0.644
accD
Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
    
  0.641
DFR68_119105
Unannotated protein.
    
  0.641
DFR68_102406
Unannotated protein.
  
  
 
0.594
DFR68_110277
Unannotated protein.
  
    0.563
DFR68_107374
Unannotated protein.
   
 
 0.488
DFR68_109163
Unannotated protein.
   
    0.465
DFR68_101918
Unannotated protein.
 
  
  0.463
Your Current Organism:
Nocardia mexicana
NCBI taxonomy Id: 1210089
Other names: N. mexicana NBRC 108244, Nocardia mexicana NBRC 108244
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.