STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613265_02487Unannotated protein. (228 aa)    
Predicted Functional Partners:
GCA_001613265_02486
Unannotated protein.
       0.870
GCA_001613265_05520
Unannotated protein.
  
     0.768
GCA_001613265_04375
Unannotated protein.
  
     0.762
GCA_001613265_05629
Unannotated protein.
  
     0.762
GCA_001613265_03807
Unannotated protein.
  
     0.756
GCA_001613265_01237
Unannotated protein.
  
     0.752
GCA_001613265_01250
Unannotated protein.
  
     0.752
GCA_001613265_02393
Unannotated protein.
  
     0.751
GCA_001613265_02485
Unannotated protein.
       0.751
GCA_001613265_00260
Unannotated protein.
  
     0.749
Your Current Organism:
Nocardia vermiculata
NCBI taxonomy Id: 1210096
Other names: N. vermiculata NBRC 100427, Nocardia vermiculata NBRC 100427
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.