STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613265_03994Unannotated protein. (381 aa)    
Predicted Functional Partners:
GCA_001613265_06059
Unannotated protein.
 
 0.998
GCA_001613265_02407
Unannotated protein.
 
  
 0.993
GCA_001613265_06054
Unannotated protein.
 
 0.992
GCA_001613265_06055
Unannotated protein.
 
  
 0.944
GCA_001613265_04188
Unannotated protein.
 
 
 0.939
GCA_001613265_06057
Unannotated protein.
 
 
 0.939
GCA_001613265_06060
Unannotated protein.
 
 
 0.903
GCA_001613265_03993
Unannotated protein.
 
   
 0.901
GCA_001613265_01220
Unannotated protein.
    
 0.882
GCA_001613265_02178
Unannotated protein.
 
 
 0.869
Your Current Organism:
Nocardia vermiculata
NCBI taxonomy Id: 1210096
Other names: N. vermiculata NBRC 100427, Nocardia vermiculata NBRC 100427
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.