STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613305_00404Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_001613305_04826
Unannotated protein.
  
 0.996
GCA_001613305_02536
Unannotated protein.
   
 0.990
GCA_001613305_02673
Unannotated protein.
  
 0.986
GCA_001613305_02672
Unannotated protein.
  
 0.980
GCA_001613305_05302
Unannotated protein.
   
 0.978
GCA_001613305_00405
Unannotated protein.
 
  
 0.973
GCA_001613305_00406
Unannotated protein.
  
  
 0.971
GCA_001613305_06823
Unannotated protein.
 
 
 0.950
GCA_001613305_00403
Unannotated protein.
 
  
 0.942
GCA_001613305_02105
Unannotated protein.
   
 0.941
Your Current Organism:
Nocardia vaccinii
NCBI taxonomy Id: 1210098
Other names: N. vaccinii NBRC 15922, Nocardia vaccinii NBRC 15922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.