STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613305_03877Unannotated protein. (620 aa)    
Predicted Functional Partners:
GCA_001613305_03878
Unannotated protein.
 
  
 0.991
GCA_001613305_03876
Unannotated protein.
       0.578
GCA_001613305_02502
Unannotated protein.
       0.535
GCA_001613305_03879
Unannotated protein.
       0.535
GCA_001613305_03929
Unannotated protein.
  
    0.509
GCA_001613305_05451
Unannotated protein.
  
    0.509
GCA_001613305_03550
Unannotated protein.
    
  0.493
GCA_001613305_05056
Unannotated protein.
  
    0.455
GCA_001613305_03881
Unannotated protein.
       0.450
GCA_001613305_01732
Unannotated protein.
  
     0.444
Your Current Organism:
Nocardia vaccinii
NCBI taxonomy Id: 1210098
Other names: N. vaccinii NBRC 15922, Nocardia vaccinii NBRC 15922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.