STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613305_05671Unannotated protein. (59 aa)    
Predicted Functional Partners:
GCA_001613305_01411
Unannotated protein.
  
   0.976
GCA_001613305_05468
Unannotated protein.
  
   0.968
GCA_001613305_01520
Unannotated protein.
   
    0.529
GCA_001613305_02062
Unannotated protein.
   
    0.525
GCA_001613305_01077
Unannotated protein.
  
 
 
 0.514
GCA_001613305_06616
Unannotated protein.
  
  
 0.506
GCA_001613305_07050
Unannotated protein.
  
  
 0.506
GCA_001613305_05672
Unannotated protein.
       0.468
GCA_001613305_06156
Unannotated protein.
   
    0.456
GCA_001613305_01658
Unannotated protein.
   
    0.445
Your Current Organism:
Nocardia vaccinii
NCBI taxonomy Id: 1210098
Other names: N. vaccinii NBRC 15922, Nocardia vaccinii NBRC 15922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.