STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613305_07986Unannotated protein. (824 aa)    
Predicted Functional Partners:
GCA_001613305_07985
Unannotated protein.
       0.773
GCA_001613305_05680
Unannotated protein.
  
  0.746
GCA_001613305_03795
Unannotated protein.
    
 
 0.683
GCA_001613305_04790
Unannotated protein.
    
 
 0.681
GCA_001613305_00081
Unannotated protein.
  
  0.662
GCA_001613305_00563
Unannotated protein.
  
  0.662
GCA_001613305_00937
Unannotated protein.
  
  0.662
GCA_001613305_00997
Unannotated protein.
  
  0.662
GCA_001613305_01386
Unannotated protein.
  
  0.662
GCA_001613305_01590
Unannotated protein.
  
  0.662
Your Current Organism:
Nocardia vaccinii
NCBI taxonomy Id: 1210098
Other names: N. vaccinii NBRC 15922, Nocardia vaccinii NBRC 15922
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.