STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613325_06691Unannotated protein. (423 aa)    
Predicted Functional Partners:
GCA_001613325_03029
Unannotated protein.
  
 
  0.734
GCA_001613325_03156
Unannotated protein.
  
 0.733
GCA_001613325_03157
Unannotated protein.
  
 0.733
GCA_001613325_04561
Unannotated protein.
  
     0.709
GCA_001613325_04832
Unannotated protein.
 
  
 
0.702
GCA_001613325_03934
Unannotated protein.
  
     0.682
GCA_001613325_03030
Unannotated protein.
 
  
 0.681
GCA_001613325_05759
Unannotated protein.
 
  
 0.669
GCA_001613325_03167
Unannotated protein.
  
 
 0.657
GCA_001613325_04578
Unannotated protein.
 
  
  0.656
Your Current Organism:
Nocardia yamanashiensis
NCBI taxonomy Id: 1210099
Other names: N. yamanashiensis NBRC 100130, Nocardia yamanashiensis NBRC 100130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.