STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001613325_07085Unannotated protein. (372 aa)    
Predicted Functional Partners:
GCA_001613325_02056
Unannotated protein.
  
 
0.844
GCA_001613325_04597
Unannotated protein.
  
 
0.832
GCA_001613325_07084
Unannotated protein.
  
   0.792
GCA_001613325_07083
Unannotated protein.
  
   0.782
GCA_001613325_06114
Unannotated protein.
  
 
0.734
GCA_001613325_07754
Unannotated protein.
  
 
 0.714
GCA_001613325_01580
Unannotated protein.
     
 0.702
GCA_001613325_05222
Unannotated protein.
 
 0.679
GCA_001613325_02225
Unannotated protein.
  
 
 0.676
GCA_001613325_04135
Unannotated protein.
  
 
 0.669
Your Current Organism:
Nocardia yamanashiensis
NCBI taxonomy Id: 1210099
Other names: N. yamanashiensis NBRC 100130, Nocardia yamanashiensis NBRC 100130
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.