STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_00022Unannotated protein. (588 aa)    
Predicted Functional Partners:
GCA_000531095_00950
Unannotated protein.
  
     0.774
GCA_000531095_02310
Unannotated protein.
  
     0.774
GCA_000531095_01920
Unannotated protein.
  
     0.762
GCA_000531095_06158
Unannotated protein.
  
     0.759
GCA_000531095_02805
Unannotated protein.
  
     0.732
GCA_000531095_00871
Unannotated protein.
  
     0.707
GCA_000531095_05342
Unannotated protein.
  
     0.605
GCA_000531095_04983
Unannotated protein.
  
     0.546
GCA_000531095_06993
Unannotated protein.
  
     0.437
GCA_000531095_05388
Unannotated protein.
  
     0.420
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.