STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_02666Unannotated protein. (299 aa)    
Predicted Functional Partners:
GCA_000531095_05059
Unannotated protein.
   0.950
GCA_000531095_06483
Unannotated protein.
   0.949
GCA_000531095_04548
Unannotated protein.
 
 
 0.770
GCA_000531095_05845
Unannotated protein.
 
 0.757
GCA_000531095_03646
Unannotated protein.
  
 
 0.736
GCA_000531095_05924
Unannotated protein.
  
     0.719
GCA_000531095_06065
Unannotated protein.
  
  
  0.708
GCA_000531095_03862
Unannotated protein.
  
  
  0.674
GCA_000531095_03861
Unannotated protein.
  
  
  0.671
GCA_000531095_04147
Unannotated protein.
  
  
  0.658
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.