STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_02954Unannotated protein. (245 aa)    
Predicted Functional Partners:
GCA_000531095_03739
Unannotated protein.
 
  
 0.907
GCA_000531095_06466
Unannotated protein.
 
 
 0.890
GCA_000531095_01488
Unannotated protein.
 
    0.786
GCA_000531095_06928
Unannotated protein.
 
  
 0.785
GCA_000531095_00268
Unannotated protein.
  
  
 0.749
GCA_000531095_05346
Unannotated protein.
  
  
 0.749
GCA_000531095_08127
Unannotated protein.
  
    0.745
GCA_000531095_06354
Unannotated protein.
   
  
 0.734
GCA_000531095_05010
Unannotated protein.
   
    0.721
GCA_000531095_00373
Unannotated protein.
   
    0.714
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.