STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_04118Unannotated protein. (519 aa)    
Predicted Functional Partners:
GCA_000531095_01861
Unannotated protein.
 
 
 0.954
GCA_000531095_00742
Unannotated protein.
   
 0.853
GCA_000531095_00033
Unannotated protein.
   
 
 0.829
GCA_000531095_07997
Unannotated protein.
   
 0.821
GCA_000531095_08002
Unannotated protein.
   
 0.821
GCA_000531095_02381
Unannotated protein.
   
 0.818
GCA_000531095_00741
Unannotated protein.
     
 0.813
GCA_000531095_07221
Unannotated protein.
 
 
 
 0.779
GCA_000531095_07220
Unannotated protein.
 
    0.624
GCA_000531095_04114
Unannotated protein.
 
    0.580
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.