STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000531095_06770Unannotated protein. (580 aa)    
Predicted Functional Partners:
GCA_000531095_06771
Unannotated protein.
       0.655
GCA_000531095_06772
Unannotated protein.
       0.603
GCA_000531095_01081
Unannotated protein.
  
     0.507
GCA_000531095_06722
Unannotated protein.
 
     0.505
GCA_000531095_06769
Unannotated protein.
       0.484
GCA_000531095_05773
Unannotated protein.
  
     0.477
GCA_000531095_06768
Unannotated protein.
       0.475
GCA_000531095_03495
Unannotated protein.
  
     0.412
GCA_000531095_04990
Unannotated protein.
  
     0.412
GCA_000531095_06668
Unannotated protein.
 
    0.400
Your Current Organism:
Gemmata massiliana
NCBI taxonomy Id: 1210884
Other names: CSUR P189, DSM 26013, G. massiliana, Gemmata sp. IIL30, strain IIL30
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.