STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002056795_02680Unannotated protein. (384 aa)    
Predicted Functional Partners:
GCA_002056795_02681
Unannotated protein.
 
    
0.819
GCA_002056795_02682
Unannotated protein.
       0.745
GCA_002056795_02693
Unannotated protein.
 
     0.741
GCA_002056795_06209
Unannotated protein.
  
  0.725
GCA_002056795_02683
Unannotated protein.
 
    0.678
GCA_002056795_03784
Unannotated protein.
  
     0.663
GCA_002056795_02690
Unannotated protein.
 
     0.660
GCA_002056795_02654
Unannotated protein.
  
 0.657
GCA_002056795_01443
Unannotated protein.
   
  0.648
GCA_002056795_01630
Unannotated protein.
   
  0.648
Your Current Organism:
Spirosoma aerolatum
NCBI taxonomy Id: 1211326
Other names: KACC 17939, NBRC 110794, S. aerolatum, Spirosoma aerolatum Kim et al. 2015, Spirosoma sp. PR1012K, strain PR1012K
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.