STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002056795_05355Unannotated protein. (1181 aa)    
Predicted Functional Partners:
GCA_002056795_01187
Unannotated protein.
 
  
 
0.923
GCA_002056795_01029
Unannotated protein.
 
 
 0.898
GCA_002056795_06088
Unannotated protein.
 
 
 0.891
GCA_002056795_03398
Unannotated protein.
 
  
 
0.873
GCA_002056795_00472
Unannotated protein.
 
  
  0.842
GCA_002056795_02936
Unannotated protein.
 
 
 0.823
GCA_002056795_01645
Unannotated protein.
 
  
 
0.815
GCA_002056795_06406
Unannotated protein.
    
 
0.802
GCA_002056795_00752
Unannotated protein.
 
 
 0.798
GCA_002056795_02941
Unannotated protein.
 
 
 0.794
Your Current Organism:
Spirosoma aerolatum
NCBI taxonomy Id: 1211326
Other names: KACC 17939, NBRC 110794, S. aerolatum, Spirosoma aerolatum Kim et al. 2015, Spirosoma sp. PR1012K, strain PR1012K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.