STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
BN77_0232Putative iron Fe3+ ABC transporter periplasmic solute-binding protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (338 aa)    
Predicted Functional Partners:
BN77_0234
Sensor protein.
  
  0.974
fbpB
Fe(3+)-transport system permease protein sfuB.
  
 
 0.922
thiP
Fused thiamin transporter subunits of ABC superfamily: membrane components; Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 
 0.852
BN77_3983
Extracellular solute-binding protein family 1.
     
 0.636
qseB
DNA-binding response regulator in two-component regulatory system with QseC; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
  
  0.633
fbpA
Fe(3+)-binding periplasmic protein.
     
 0.622
fbpC-2
Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
    
  0.618
lolD
Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
  0.580
BN77_1552
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.574
CCM78128.1
Hypothetical protein; No homology to any previously reported sequences.
     
 0.574
Your Current Organism:
Rhizobium mesoamericanum
NCBI taxonomy Id: 1211777
Other names: R. mesoamericanum STM3625, Rhizobium mesoamericanum STM3625, Rhizobium mesoamericanum str. STM3625, Rhizobium mesoamericanum strain STM3625
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