Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BN77_1391 | BN77_1394 | BN77_1391 | BN77_1394 | Sensor protein. | Phosphate ABC transporter, inner membrane subunit PstA. | 0.563 |
BN77_1391 | BN77_4342 | BN77_1391 | BN77_4342 | Sensor protein. | Sensor protein. | 0.838 |
BN77_1391 | CCM78128.1 | BN77_1391 | BN77_p10083 | Sensor protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.966 |
BN77_1391 | phoB | BN77_1391 | BN77_1397 | Sensor protein. | Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.966 |
BN77_1391 | phoU | BN77_1391 | BN77_1396 | Sensor protein. | Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake. | 0.639 |
BN77_1391 | pstB | BN77_1391 | BN77_1395 | Sensor protein. | Phosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.557 |
BN77_1391 | pstC | BN77_1391 | BN77_1393 | Sensor protein. | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.563 |
BN77_1391 | pstS | BN77_1391 | BN77_1392 | Sensor protein. | Phosphate ABC transporter, substrate-binding protein. | 0.662 |
BN77_1394 | BN77_1391 | BN77_1394 | BN77_1391 | Phosphate ABC transporter, inner membrane subunit PstA. | Sensor protein. | 0.563 |
BN77_1394 | BN77_4342 | BN77_1394 | BN77_4342 | Phosphate ABC transporter, inner membrane subunit PstA. | Sensor protein. | 0.525 |
BN77_1394 | CCM78128.1 | BN77_1394 | BN77_p10083 | Phosphate ABC transporter, inner membrane subunit PstA. | Hypothetical protein; No homology to any previously reported sequences. | 0.519 |
BN77_1394 | nodQ | BN77_1394 | BN77_p280004 | Phosphate ABC transporter, inner membrane subunit PstA. | Bifunctional enzyme NodQ (Includes: Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.792 |
BN77_1394 | phoB | BN77_1394 | BN77_1397 | Phosphate ABC transporter, inner membrane subunit PstA. | Function of homologous gene experimentally demonstrated in an other organism; regulator. | 0.540 |
BN77_1394 | phoU | BN77_1394 | BN77_1396 | Phosphate ABC transporter, inner membrane subunit PstA. | Negative regulator of PhoR/PhoB two-component regulator; Plays a role in the regulation of phosphate uptake. | 0.990 |
BN77_1394 | pstB | BN77_1394 | BN77_1395 | Phosphate ABC transporter, inner membrane subunit PstA. | Phosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.998 |
BN77_1394 | pstC | BN77_1394 | BN77_1393 | Phosphate ABC transporter, inner membrane subunit PstA. | Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.996 |
BN77_1394 | pstS | BN77_1394 | BN77_1392 | Phosphate ABC transporter, inner membrane subunit PstA. | Phosphate ABC transporter, substrate-binding protein. | 0.997 |
BN77_4342 | BN77_1391 | BN77_4342 | BN77_1391 | Sensor protein. | Sensor protein. | 0.838 |
BN77_4342 | BN77_1394 | BN77_4342 | BN77_1394 | Sensor protein. | Phosphate ABC transporter, inner membrane subunit PstA. | 0.525 |
BN77_4342 | CCM78128.1 | BN77_4342 | BN77_p10083 | Sensor protein. | Hypothetical protein; No homology to any previously reported sequences. | 0.995 |
page 1 of 4