STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN77_3143Extracellular solute-binding protein family 1. (411 aa)    
Predicted Functional Partners:
BN77_3142
Sugar ABC transporter.
 
  0.967
BN77_3141
Putative sugar ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  0.960
BN77_4255
Putative sugar ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  0.943
BN77_4256
Putative sugar ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  0.943
ugpC-2
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
 
  0.867
ugpC-4
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
  
  0.771
BN77_3138
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.739
ugpC-10
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
   
  0.713
ugpC-9
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
   
  0.695
ugpC-5
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
   
  0.694
Your Current Organism:
Rhizobium mesoamericanum
NCBI taxonomy Id: 1211777
Other names: R. mesoamericanum STM3625, Rhizobium mesoamericanum STM3625, Rhizobium mesoamericanum str. STM3625, Rhizobium mesoamericanum strain STM3625
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.