STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhqO-2Putative ring-cleaving dioxygenase mhqO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (310 aa)    
Predicted Functional Partners:
BN77_3350
Phospholipase/carboxylesterase family protein.
    0.876
yliK
methylmalonyl-CoA mutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.762
BN77_1982
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
  
  0.650
BN77_2619
Beta-lactamase domain protein.
     
 0.589
trpB
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
  
  0.582
CCM78359.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
       0.582
CCM78365.1
Putative urea amidolyase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.550
CCM78357.1
Putative isochorismatase hydrolase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.543
trpA
Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.528
CCM78792.1
Amino acid processing protein.
   
 
  0.525
Your Current Organism:
Rhizobium mesoamericanum
NCBI taxonomy Id: 1211777
Other names: R. mesoamericanum STM3625, Rhizobium mesoamericanum STM3625, Rhizobium mesoamericanum str. STM3625, Rhizobium mesoamericanum strain STM3625
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.