STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM79675.1Transposase. (115 aa)    
Predicted Functional Partners:
CCM79674.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.941
BN77_p30105
Insertion sequence ATP-binding protein; Gene remnant; putative factor.
       0.773
BN77_p270044
Putative integrase catalytic region (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.744
CCM79663.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.705
CCM79802.1
Putative tranposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
     0.699
CCM79567.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.680
CCM79816.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.632
CCM79825.1
Transposase.
  
     0.587
CCM79671.1
Transposase.
 
     0.572
CCM79803.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.568
Your Current Organism:
Rhizobium mesoamericanum
NCBI taxonomy Id: 1211777
Other names: R. mesoamericanum STM3625, Rhizobium mesoamericanum STM3625, Rhizobium mesoamericanum str. STM3625, Rhizobium mesoamericanum strain STM3625
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.