STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000327285_00214Unannotated protein. (414 aa)    
Predicted Functional Partners:
GCA_000327285_02660
Unannotated protein.
 
 
 
 0.829
GCA_000327285_00692
Unannotated protein.
 
     0.761
GCA_000327285_01857
Unannotated protein.
  
 0.750
GCA_000327285_00215
Unannotated protein.
 
  
 0.724
GCA_000327285_01835
Unannotated protein.
    
  0.694
GCA_000327285_01912
Unannotated protein.
    
  0.682
GCA_000327285_00803
Unannotated protein.
  
 
 0.680
GCA_000327285_01369
Unannotated protein.
    
 0.680
GCA_000327285_01610
Unannotated protein.
  
 
 0.680
GCA_000327285_03207
Unannotated protein.
    
 0.680
Your Current Organism:
Holdemania massiliensis
NCBI taxonomy Id: 1211819
Other names: H. massiliensis AP2, Holdemania massiliensis AP2, Holdemania sp. AP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.