STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000327285_03428Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_000327285_00405
Unannotated protein.
  
 
 0.892
GCA_000327285_01874
Unannotated protein.
 
 
  0.856
GCA_000327285_02108
Unannotated protein.
 
 
  0.817
GCA_000327285_02290
Unannotated protein.
 
 
 
0.796
GCA_000327285_00323
Unannotated protein.
 
 
 
0.783
GCA_000327285_00527
Unannotated protein.
  
  
 0.727
GCA_000327285_00294
Unannotated protein.
    
 0.703
GCA_000327285_01587
Unannotated protein.
    
 0.700
GCA_000327285_03265
Unannotated protein.
     
 0.680
GCA_000327285_00646
Unannotated protein.
    
 0.673
Your Current Organism:
Holdemania massiliensis
NCBI taxonomy Id: 1211819
Other names: H. massiliensis AP2, Holdemania massiliensis AP2, Holdemania sp. AP2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.