STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820785_00573Unannotated protein. (449 aa)    
Predicted Functional Partners:
GCA_000820785_02623
Unannotated protein.
 
 
 0.988
GCA_000820785_02086
Unannotated protein.
   
 0.936
GCA_000820785_02624
Unannotated protein.
 
 
 
 0.935
GCA_000820785_04527
Unannotated protein.
  
 
 0.829
GCA_000820785_05999
Unannotated protein.
  
 0.811
GCA_000820785_03899
Unannotated protein.
    
 
 0.739
GCA_000820785_03753
Unannotated protein.
  
  0.710
GCA_000820785_03632
Unannotated protein.
   
  0.697
GCA_000820785_05409
Unannotated protein.
   
  0.697
GCA_000820785_00568
Unannotated protein.
     
 0.694
Your Current Organism:
Streptomyces massiliensis
NCBI taxonomy Id: 1211820
Other names: C. Streptomyces massiliensis AP10, Candidatus Streptomyces massiliensis AP10, Streptomyces sp. AP10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.