STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820785_04929Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_000820785_04939
Unannotated protein.
 
 
   0.906
GCA_000820785_05693
Unannotated protein.
 
 
  
0.825
GCA_000820785_07542
Unannotated protein.
 
 
  
0.825
GCA_000820785_03999
Unannotated protein.
 
 
  
0.823
GCA_000820785_06117
Unannotated protein.
 
 
  
0.819
GCA_000820785_00482
Unannotated protein.
 
  0.806
GCA_000820785_01547
Unannotated protein.
 
  0.804
GCA_000820785_02086
Unannotated protein.
  
 0.796
GCA_000820785_00488
Unannotated protein.
  
  0.767
GCA_000820785_00014
Unannotated protein.
 
 0.733
Your Current Organism:
Streptomyces massiliensis
NCBI taxonomy Id: 1211820
Other names: C. Streptomyces massiliensis AP10, Candidatus Streptomyces massiliensis AP10, Streptomyces sp. AP10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.