STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820765_00491Unannotated protein. (553 aa)    
Predicted Functional Partners:
GCA_000820765_02374
Unannotated protein.
 
 0.985
GCA_000820765_02375
Unannotated protein.
  
 0.983
GCA_000820765_02434
Unannotated protein.
 
 0.981
GCA_000820765_02028
Unannotated protein.
  
 0.980
GCA_000820765_00807
Unannotated protein.
  
 0.979
GCA_000820765_01720
Unannotated protein.
  
 0.979
GCA_000820765_02119
Unannotated protein.
   
 0.978
GCA_000820765_01663
Unannotated protein.
   
 0.977
GCA_000820765_02132
Unannotated protein.
   
 0.976
GCA_000820765_02023
Unannotated protein.
  
 0.975
Your Current Organism:
Soleaferrea massiliensis
NCBI taxonomy Id: 1211843
Other names: C. Soleaferrea massiliensis AP7, Candidatus Soleaferrea massiliensis AP7, Ruminococcaceae bacterium AP7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.