STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000820765_02334Unannotated protein. (450 aa)    
Predicted Functional Partners:
GCA_000820765_02310
Unannotated protein.
 
 0.991
GCA_000820765_01974
Unannotated protein.
  
 0.984
GCA_000820765_02005
Unannotated protein.
  
 0.945
GCA_000820765_00016
Unannotated protein.
 
 
 0.920
GCA_000820765_01705
Unannotated protein.
   
 0.902
GCA_000820765_01069
Unannotated protein.
 
 
 0.874
GCA_000820765_00343
Unannotated protein.
 
 
 0.857
GCA_000820765_01252
Unannotated protein.
 
 0.853
GCA_000820765_01644
Unannotated protein.
   
 0.850
GCA_000820765_02333
Unannotated protein.
  
    0.838
Your Current Organism:
Soleaferrea massiliensis
NCBI taxonomy Id: 1211843
Other names: C. Soleaferrea massiliensis AP7, Candidatus Soleaferrea massiliensis AP7, Ruminococcaceae bacterium AP7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.