STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455285_01193Unannotated protein. (262 aa)    
Predicted Functional Partners:
GCA_000455285_01185
Unannotated protein.
 
     0.768
GCA_000455285_00747
Unannotated protein.
  
 
 0.704
GCA_000455285_01812
Unannotated protein.
  
 
  0.677
GCA_000455285_00629
Unannotated protein.
  
 
 0.669
GCA_000455285_00231
Unannotated protein.
    
 0.660
GCA_000455285_01094
Unannotated protein.
    
 0.660
GCA_000455285_02454
Unannotated protein.
  
  
  0.644
GCA_000455285_03056
Unannotated protein.
    
 0.622
GCA_000455285_00252
Unannotated protein.
    
 0.619
GCA_000455285_02784
Unannotated protein.
   
 
 0.603
Your Current Organism:
Stoquefichus massiliensis
NCBI taxonomy Id: 1211844
Other names: C. Stoquefichus massiliensis AP9, Candidatus Stoquefichus massiliensis AP9, Erysipelotrichaceae bacterium AP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.