STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455285_02171Unannotated protein. (216 aa)    
Predicted Functional Partners:
GCA_000455285_02170
Unannotated protein.
 
  
 0.842
GCA_000455285_02172
Unannotated protein.
 
   
 0.672
GCA_000455285_02174
Unannotated protein.
       0.577
GCA_000455285_02173
Unannotated protein.
       0.572
GCA_000455285_03133
Unannotated protein.
  
    0.545
GCA_000455285_02375
Unannotated protein.
   
  
 0.445
GCA_000455285_02689
Unannotated protein.
     
 0.438
GCA_000455285_00618
Unannotated protein.
    
  0.429
GCA_000455285_03278
Unannotated protein.
    
 0.416
Your Current Organism:
Stoquefichus massiliensis
NCBI taxonomy Id: 1211844
Other names: C. Stoquefichus massiliensis AP9, Candidatus Stoquefichus massiliensis AP9, Erysipelotrichaceae bacterium AP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.