STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455285_03220Unannotated protein. (574 aa)    
Predicted Functional Partners:
GCA_000455285_03284
Unannotated protein.
  
    0.596
GCA_000455285_03056
Unannotated protein.
   
    0.575
GCA_000455285_02398
Unannotated protein.
  
    0.506
GCA_000455285_03216
Unannotated protein.
  
  
 0.505
GCA_000455285_00510
Unannotated protein.
  
    0.503
GCA_000455285_03218
Unannotated protein.
       0.503
GCA_000455285_03219
Unannotated protein.
       0.503
GCA_000455285_03481
Unannotated protein.
  
  
 0.468
GCA_000455285_00166
Unannotated protein.
  
    0.450
GCA_000455285_03217
Unannotated protein.
       0.423
Your Current Organism:
Stoquefichus massiliensis
NCBI taxonomy Id: 1211844
Other names: C. Stoquefichus massiliensis AP9, Candidatus Stoquefichus massiliensis AP9, Erysipelotrichaceae bacterium AP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.