STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000455285_03238Unannotated protein. (516 aa)    
Predicted Functional Partners:
GCA_000455285_02794
Unannotated protein.
  
 0.915
GCA_000455285_00337
Unannotated protein.
  
     0.775
GCA_000455285_03326
Unannotated protein.
  
 
 0.641
GCA_000455285_01050
Unannotated protein.
  
     0.610
GCA_000455285_01823
Unannotated protein.
  
 
 0.609
GCA_000455285_01077
Unannotated protein.
  
     0.592
GCA_000455285_03236
Unannotated protein.
       0.574
GCA_000455285_03237
Unannotated protein.
       0.574
GCA_000455285_03030
Unannotated protein.
  
 
 0.569
GCA_000455285_00979
Unannotated protein.
    
 0.568
Your Current Organism:
Stoquefichus massiliensis
NCBI taxonomy Id: 1211844
Other names: C. Stoquefichus massiliensis AP9, Candidatus Stoquefichus massiliensis AP9, Erysipelotrichaceae bacterium AP9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.