STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0V9S3_PEDHCRab-GAP TBC domain-containing protein. (395 aa)    
Predicted Functional Partners:
E0VJ87_PEDHC
GTP-binding nuclear protein RAN1, putative.
     
 0.710
E0VNE9_PEDHC
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
 
      0.702
E0V9S0_PEDHC
LIM/homeobox protein Awh, putative.
 
      0.619
E0VK29_PEDHC
Rab-GAP TBC domain-containing protein.
      
 0.587
E0VTT8_PEDHC
Protein C9orf114, putative.
      
 0.519
E0W319_PEDHC
Rab-GAP TBC domain-containing protein.
      
 0.499
E0VL15_PEDHC
Uncharacterized protein.
      
 0.495
E0W1N8_PEDHC
GTPase-activating protein GYP5, putative.
     
 0.492
E0VFS3_PEDHC
Rab-GAP TBC domain-containing protein.
      
 0.491
E0VPZ9_PEDHC
SH3 domain-containing protein.
   
    0.473
Your Current Organism:
Pediculus humanus
NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse
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