STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0VCG1_PEDHCWD-repeat protein, putative. (416 aa)    
Predicted Functional Partners:
E0VPI5_PEDHC
Uncharacterized protein.
   
 0.951
E0W0J5_PEDHC
U4/U6 small nuclear ribonucleoprotein Prp31, putative.
   
 0.921
E0VQE0_PEDHC
Pre-mRNA splicing factor, putative.
   
 0.910
E0VM49_PEDHC
Pre-mRNA-processing-splicing factor, putative.
    
 0.906
E0VV24_PEDHC
U520, putative.
    
 0.897
E0VZ81_PEDHC
116 kDa U5 small nuclear ribonucleoprotein component, putative.
   
 0.881
E0VZI2_PEDHC
U4/U6.U5 tri-snRNP-associated protein, putative.
    
 0.875
E0VRG4_PEDHC
U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.861
E0VGP8_PEDHC
Sm domain-containing protein.
    
 0.854
E0VET7_PEDHC
Membrane-associated protein, putative; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.834
Your Current Organism:
Pediculus humanus
NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse
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