E0VMT2_PEDHC protein (Pediculus humanus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

E0VMT2_PEDHC

Peroxisomal membrane protein 11C, putative. (232 aa)

Predicted Functional Partners:

E0VH56_PEDHC

0.950

E0W135_PEDHC

0.929

E0W146_PEDHC

0.886

E0VPF8_PEDHC

0.848

E0VVR6_PEDHC

0.847

E0VLZ5_PEDHC

0.797

E0VVN5_PEDHC

0.779

E0VV12_PEDHC

0.716

E0VGG6_PEDHC

0.665

E0VVZ4_PEDHC

0.626

Your Current Organism:

Pediculus humanus

NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
E0VGG6_PEDHC	E0VH56_PEDHC	E0VGG6	E0VH56	Uncharacterized protein.	Peroxisomal membrane protein 11A, putative.	0.665
E0VGG6_PEDHC	E0VLZ5_PEDHC	E0VGG6	E0VLZ5	Uncharacterized protein.	Peroxisomal biogenesis factor, putative.	0.493
E0VGG6_PEDHC	E0VMT2_PEDHC	E0VGG6	E0VMT2	Uncharacterized protein.	Peroxisomal membrane protein 11C, putative.	0.665
E0VGG6_PEDHC	E0VPF8_PEDHC	E0VGG6	E0VPF8	Uncharacterized protein.	Peroxin, putative.	0.994
E0VGG6_PEDHC	E0VVN5_PEDHC	E0VGG6	E0VVN5	Uncharacterized protein.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.453
E0VGG6_PEDHC	E0VVR6_PEDHC	E0VGG6	E0VVR6	Uncharacterized protein.	Pex14_N domain-containing protein.	0.994
E0VGG6_PEDHC	E0VVZ4_PEDHC	E0VGG6	E0VVZ4	Uncharacterized protein.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.457
E0VGG6_PEDHC	E0W135_PEDHC	E0VGG6	E0W135	Uncharacterized protein.	Peroxisomal biogenesis factor, putative.	0.488
E0VGG6_PEDHC	E0W146_PEDHC	E0VGG6	E0W146	Uncharacterized protein.	Peroxisomal membrane protein PEX13, putative.	0.994
E0VH56_PEDHC	E0VGG6_PEDHC	E0VH56	E0VGG6	Peroxisomal membrane protein 11A, putative.	Uncharacterized protein.	0.665
E0VH56_PEDHC	E0VLZ5_PEDHC	E0VH56	E0VLZ5	Peroxisomal membrane protein 11A, putative.	Peroxisomal biogenesis factor, putative.	0.894
E0VH56_PEDHC	E0VMT2_PEDHC	E0VH56	E0VMT2	Peroxisomal membrane protein 11A, putative.	Peroxisomal membrane protein 11C, putative.	0.950
E0VH56_PEDHC	E0VPF8_PEDHC	E0VH56	E0VPF8	Peroxisomal membrane protein 11A, putative.	Peroxin, putative.	0.908
E0VH56_PEDHC	E0VV12_PEDHC	E0VH56	E0VV12	Peroxisomal membrane protein 11A, putative.	Peroxisomal membrane protein PEX16.	0.858
E0VH56_PEDHC	E0VVN5_PEDHC	E0VH56	E0VVN5	Peroxisomal membrane protein 11A, putative.	Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.	0.890
E0VH56_PEDHC	E0VVR6_PEDHC	E0VH56	E0VVR6	Peroxisomal membrane protein 11A, putative.	Pex14_N domain-containing protein.	0.931
E0VH56_PEDHC	E0VVZ4_PEDHC	E0VH56	E0VVZ4	Peroxisomal membrane protein 11A, putative.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.702
E0VH56_PEDHC	E0W135_PEDHC	E0VH56	E0W135	Peroxisomal membrane protein 11A, putative.	Peroxisomal biogenesis factor, putative.	0.978
E0VH56_PEDHC	E0W146_PEDHC	E0VH56	E0W146	Peroxisomal membrane protein 11A, putative.	Peroxisomal membrane protein PEX13, putative.	0.930
E0VLZ5_PEDHC	E0VGG6_PEDHC	E0VLZ5	E0VGG6	Peroxisomal biogenesis factor, putative.	Uncharacterized protein.	0.493