STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0W0Y2_PEDHCDNA repair and recombination protein RAD54B, putative. (840 aa)    
Predicted Functional Partners:
E0VV31_PEDHC
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
  
 
 0.917
E0VYD7_PEDHC
Uncharacterized protein.
  
  
 
0.909
E0VQV6_PEDHC
Uncharacterized protein.
 
  
   0.843
E0VJ59_PEDHC
RECA_2 domain-containing protein.
  
 
 0.793
E0VAT8_PEDHC
Uncharacterized protein; Belongs to the RecA family.
  
 
 0.725
E0VPE3_PEDHC
ERCC4 domain-containing protein.
   
 0.702
E0VRP4_PEDHC
Exonuclease, putative.
   
 0.689
E0VMG7_PEDHC
Blooms syndrome DNA helicase, putative.
  
 
 0.671
E0VJY6_PEDHC
RECA_2 domain-containing protein.
  
 
 0.644
E0VPP3_PEDHC
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 
 0.641
Your Current Organism:
Pediculus humanus
NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse
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